Payment Portals for Indie Authors

A complete guide to payment portals for indie authors using direct sales websites. Covers Stripe, PayPal, Shopify Payments, WooCommerce integration, and global currency options.

Updated on June 24, 2025 by Randall Wood

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Payment Portals for Indie Authors: Powering Secure, Global Sales


A payment portal is the system that processes financial transactions on your direct sales website. It’s what allows readers to purchase your eBooks, audiobooks, print books, bundles, or merchandise using credit cards, digital wallets, or other online methods. Without a payment portal, your shopping cart can’t complete the sale—and you can’t get paid.

For indie authors, the most common payment portals include Stripe, PayPal, Shopify Payments, and Square. These tools are integrated into your website (via Shopify, WooCommerce, or other platforms) and work behind the scenes to verify cards, transfer money, calculate fees, and issue receipts.

A well-integrated payment portal ensures fast, smooth checkout and boosts reader trust. A poor one leads to abandoned carts, failed transactions, and lost revenue. Choosing the right portal—and setting it up properly—is one of the most important steps in launching your author store.


Stripe: The Industry Standard

Stripe is one of the most popular payment processors in the world and the most commonly used for indie author websites. It supports all major credit cards, debit cards, and wallets (like Apple Pay and Google Pay), and works with Shopify, WooCommerce, Payhip, BookFunnel, and dozens of other platforms.

Stripe is built for developers, but it’s easy to set up through plugins or direct integrations. It supports one-time payments, subscriptions, and recurring billing. It also handles currency conversion automatically, making it ideal for international readers.

Authors using WooCommerce can install the WooCommerce Stripe Gateway plugin to enable Stripe in minutes. Shopify users get Stripe automatically through Shopify Payments.

Stripe charges 2.9% + 30¢ per transaction in the U.S., with slightly higher rates for international cards. Funds are usually deposited into your bank account within 2–3 business days.

It’s fast, reliable, and transparent—ideal for indie authors who want a seamless reader experience and quick access to their funds.


PayPal: Ubiquitous but Imperfect

PayPal is a well-known option that readers often trust, especially for smaller purchases. It allows customers to pay using a PayPal balance, linked bank account, or credit card—even without creating a PayPal account in some cases.

It integrates easily with Shopify and WooCommerce, though the setup can be more finicky than Stripe. PayPal offers some fraud protection and buyer confidence, but it can be frustrating for authors due to:

  • Account holds or freezes, especially for new users
  • Complicated fee structures
  • Lack of customization at checkout

Still, having PayPal as an option is smart. Many readers prefer it, especially internationally. Just don’t make it your only payment option. Pairing it with Stripe or Shopify Payments offers the best coverage.

Fees for PayPal are typically 2.9% + $0.30 domestically, with currency conversion fees adding another 2–4% depending on the region.


Shopify Payments: Built-In and Optimized

If you’re using Shopify, then Shopify Payments is your default payment processor—built on top of Stripe, but fully integrated into the Shopify dashboard.

This means you don’t have to manage a separate Stripe account, and you get access to extra features like fraud analysis, accelerated checkouts, and Apple/Google Pay buttons automatically appearing based on the customer’s device.

Shopify Payments supports multiple currencies and offers a unified view of your payouts, taxes, and transaction history. Combined with Shopify’s built-in abandoned cart recovery and analytics, it creates a full funnel for managing your store.

The fees are identical to Stripe: 2.9% + $0.30 for U.S. transactions. However, Shopify may charge extra fees if you use a third-party gateway instead, so it’s generally best to stick with Shopify Payments unless you have a specific need.


WooCommerce Payment Options

WooCommerce gives authors more flexibility—but also more responsibility—when it comes to payment gateways. You can install multiple payment portals, including:

  • Stripe
  • PayPal Standard
  • PayPal Checkout
  • Square
  • Apple Pay / Google Pay (via Stripe)
  • Mollie (for European users)

Each of these requires plugin installation and configuration. For Stripe, use the official WooCommerce plugin. For PayPal, WooCommerce now recommends the new PayPal Payments plugin, which replaces the old Standard version.

All payment settings live inside your WooCommerce dashboard. You can configure which countries to accept payments from, which currencies to allow, and whether to accept one-time or recurring payments.


Global Payments and Currency Conversion

Direct sales don’t stop at national borders. Indie authors often serve readers in Canada, the UK, Australia, and the EU. Your payment portal needs to support:

  • Currency display and conversion
  • Localized checkout (language and format)
  • International taxes (like VAT)
  • Payment methods popular in specific regions

Stripe, Shopify Payments, and PayPal all support multi-currency. Shopify allows you to display localized pricing with auto-conversion at checkout. Stripe also detects location and adjusts the billing currency.

For WooCommerce, use plugins like WooCommerce Multi-Currency to support global pricing. You can also integrate TaxJar or Quaderno to automatically calculate and apply VAT.

This setup ensures readers aren’t turned away at checkout due to unfamiliar pricing or unavailable payment methods.


Receipts, Confirmations, and Recordkeeping

After a purchase is completed, your payment portal triggers a series of automations. These usually include:

  • A confirmation email to the buyer
  • A receipt with order ID and item details
  • A webhook or API call to BookFunnel for delivery
  • Optional tagging in your email provider (via Zapier or native integration)

Shopify and WooCommerce allow you to customize receipts and thank-you pages. You can include upsell offers, bonus links, or coupon codes for future purchases.

All payments are logged in your dashboard and can be exported for accounting or taxes. Services like ScribeCount let you combine these records with sales from Amazon, Apple, and other retailers—offering one clear view of your income.


Refunds and Disputes

Payment portals also handle refunds and disputes. If a customer requests a refund, you can process it directly through your dashboard in Stripe, Shopify, or PayPal. Funds are returned to the customer automatically, and you receive a notification.

Disputes (aka chargebacks) are more serious. Stripe and PayPal both allow customers to contest a charge, often claiming the item wasn’t received or wasn’t as described. Providing delivery confirmation via BookFunnel, email receipts, and clear product descriptions can help you defend against these cases.

Keeping your policies clear—and customer service responsive—goes a long way toward minimizing disputes.


Final Thoughts: Getting Paid Should Be Simple

The ability to sell books directly to readers is one of the most powerful opportunities available to indie authors today. But that opportunity relies on payment portals that are fast, secure, and compatible with your store.

Stripe is the most flexible and reliable processor. Shopify Payments is seamless and full-featured. PayPal adds buyer trust and global reach. Together, these tools let you accept payments from readers around the world—without needing to become a financial expert.

Your readers want to support you. They want to buy your books. The right payment setup makes that easy—and makes sure you get paid on time, every time.

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